BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020H04SP1|AL427681
(570 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 969 0.0
>3x_Contig1619
Length = 7770
Score = 969 bits (481), Expect = 0.0
Identities = 545/572 (95%), Gaps = 5/572 (0%)
Strand = Plus / Minus
Query: 1 gatcataaattggtttcatagataatacttctaaaataaaatctaatggtactaattcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2673 gatcataaattggtttcatagataatacttctaaaataaaatctaatggtactaattcat 2614
Query: 61 tcttttgaaaatatctattagaattaatacaccccgcggcctcctcccttcggggggagt 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2613 tcttttgaaaatatctattagaattaatacaccccgcggc-tcctcccttcggggggagt 2555
Query: 121 ccgcggggaaagatctaaatttatcttccccccgcggcatcacccaaccctagggttggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2554 ccgcggggaaagatctaaatttatcttccccccgcggcatcacccaaccctagggttggg 2495
Query: 181 tgagccgcggggggctaataagaagktgaccctcttaatgttttatgtaaaccatgtttt 240
||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||
Sbjct: 2494 tgagccgcggggggctaataataa-ttgaccctct-aatgttttatgtaaaccatgtttt 2437
Query: 241 ataatgataatactagaaaatcacattacaaaatcaatatattttctagtatataabcca 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2436 ataatgataatactagaaaatcacattacaaaatcaatatattttctagtatataatcca 2377
Query: 301 ctatttaacatagttggaaakmcttgataatvtaatctatcagtactagaaatttaaaat 360
|||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 2376 ctatttaacatagttggaaatacttgataatataatctatcagtactagaaatttaaaat 2317
Query: 361 cnanannnatsacaancttccccgcggactcctcccctttaaagggattaccaggggagg 420
| | | || || | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2316 ctatatttattactatcttccccgcggactcctcccctttaaagggattaccaggggagg 2257
Query: 421 agccgcggggtttatraatbtbatbagtagatttaggtaaatcatataabavvctattat 480
||||||||||||||| ||| | || |||||||||||||||||||||||| | |||||||
Sbjct: 2256 agccgcggggtttataaattttattagtagatttaggtaaatcatataataaactattat 2197
Query: 481 caggagttcaatttaaaatagtatcttgaatagccttcattaaakcttccccgcggtctc 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2196 caggagttcaatttaaaatagtatcttgaatagccttcattaaatcttccccgcggtctc 2137
Query: 541 cccccgaa--gaggagccgcgggtgaatttat 570
|||||||| ||||||||||||||||||||||
Sbjct: 2136 cccccgaagggaggagccgcgggtgaatttat 2105
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.713 1.32
Gapped
Lambda K H
1.40 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3511
Number of Sequences: 1807
Number of extensions: 3511
Number of successful extensions: 127
Number of sequences better than 1.0e-20: 1
length of query: 570
length of database: 10,358,551
effective HSP length: 16
effective length of query: 554
effective length of database: 10,329,639
effective search space: 5722620006
effective search space used: 5722620006
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.2 bits)